I was trying to combine the 2 avi files and finally came with the good output. Here are the commands I've used to do it.
1) First rename the files to be appended with sequential numbers in it.
cat v1.avi v2.avi > vtest.avi
2) Then invoke mencoder to get the audio and video synchronization.
mencoder -forceidx -oac copy -ovc copy vtest.avi -o vtest_final.avi
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